BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB020B07LP1|AL427576
(301 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1802 554 e-158
>3x_Contig1802
Length = 45229
Score = 554 bits (277), Expect = e-158
Identities = 282/285 (98%)
Strand = Plus / Plus
Query: 5 aaagtagaagaggaagaggaagaggaccccgatgttgtgcctccaactcctaaagataaa 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 19536 aaagtagaagaggaagaggaagaggaccccgatgttgtgcctccaactcctaaagataaa 19595
Query: 65 amaatcgcgtttggaaaacgtaggaaccgaaaggaaaatcgcaacagtcatctgttcttc 124
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 19596 acaatcgcgtttggaaaacgtaggaaccgaaaggaaaatcgcaacagtcatctgttcttc 19655
Query: 125 aaaaagtatcaaatcctaacgtctcacagtacactgataacaggaaaaaaaaacgttcac 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 19656 aaaaagtatcaaatcctaacgtctcacagtacactgataacaggaaaaaaaaacgttcac 19715
Query: 185 cgaaagaggtgcaaggttccaaccgaagacgagaatgatgtamccgtcctatccacgata 244
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 19716 cgaaagaggtgcaaggttccaaccgaagacgagaatgatgtacccgtcctatccacgata 19775
Query: 245 aaacgtgatagcttgctcagagtttcaatatgacctgttgccata 289
|| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 19776 aagcgtgatagcttgctcagagtttcaatatgacctgttgccata 19820
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.39 0.712 1.32
Gapped
Lambda K H
1.39 0.712 1.32
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2386
Number of Sequences: 1807
Number of extensions: 2386
Number of successful extensions: 141
Number of sequences better than 1.0e-20: 1
length of query: 301
length of database: 10,358,551
effective HSP length: 15
effective length of query: 286
effective length of database: 10,331,446
effective search space: 2954793556
effective search space used: 2954793556
T: 0
A: 40
X1: 6 (12.0 bits)
X2: 15 (30.0 bits)
S1: 12 (24.5 bits)
S2: 49 (98.5 bits)